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Complications of extracting protein names

March 30th, 2008 · No Comments

I tried applyCRF, experiences:

The list output combines the ‘B-Protein’ and ‘I-Protein’ of the other output formats
The resulting names are often more than a gene symbol (e.g. ‘NRG1 gene’)
Sometimes a B-Protein is truncated and a gene symbol extension is the first I-Protein (e.g. ‘DNAse’, ‘I’)
B-Proteins can have little mistakes (e.g. ‘STA1,’), with regexp I clear comma’s [...]

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Tags: BioAID_dev · NER